Protein ID

Tryptic digest of a simple mixture followed by MS analysis and database search using PEAKS 10 software.

Submission form for Protein ID

Equipment Used: Thermo Easy nLC Orbitrap Exploris 240

Facility: Mass Spectrometry

Advanced Light Microscopy

Training on and subsequent independent use of advanced light microscopes.

Assisted use of advanced light microscopes.

Facility: Molecular and Cellular Imaging

Agilent TapeStation 4150 Service

The TapeStation system allows for automated electrophoresis of most DNA and RNA samples. Typical applications include quality control (QC) of NGS libraries and RNA extractions (ie. RIN).  This method excels in the determination of fragment length distribution of nucleic acid samples, but is not typically relied on for accurate quantification.  The TapeStation can be used in place of the BioAnalyzer for most applications, but cannot currently be used for small/micro RNA analysis.

Service includes Standard and High Sensitivity assays for RNA, DNA >1kb, and DNA >5kb, as well as a Standard gDNA assay.

Request Form: AAC TapeStation Request Form

 

Equipment Used: Agilent TapeStation 4150

Facility: Genomics

DNA Sequencing

Sample submission considerations.

The facility provides a number of standard sequencing primers for common plasmid vectors.
Custom primers should be provided at a concentration of 5 uM (=5 pmol/uL).

Request Forms:
Individual Sample Submissions
Sanger Sequencing Request - Use this form to submit DNA templates (ie. PCR amplicons, Plasmids, etc.) for sequencing
DIY Sequencing Request - Use this for to submit completed flourescent Sanger products (ie. BigDye reactions) for sequencing

For full and half-plate submissions please contact the facility

Equipment Used: Applied Biosystems 3730 DNA analyzer

Facility: Genomics

Electron Microscopy

Assisted or independent use of electron microscopes.

Facility: Molecular and Cellular Imaging

Flow Cytometry

Data Acquisition

Cell Sorting

Facility: Molecular and Cellular Imaging

Fragment Analysis

Gene Expression Services

Request Forms:
Digital Droplet PCR Request
Real-Time PCR Registration
Real-Time PCR Request

Equipment Used:
BioRad Qx200 Droplet Digital PCR (ddPCR) System
QuantStudio 7 Pro Real-Time PCR System

Facility: Genomics

Image Processing

  • LASAF - Leica Application Software Advanced Fluorescence
  • Volocity
  • Metamorph
  • NIS Elements
  • Zen 2.6 Blue, ZEN Lite
  • Sony Cell Sorter software
  • Gen5 Image+
  • Amira
  • Imod

Facility: Molecular and Cellular Imaging

MALDI-TOF Analysis

Fast mass analysis of proteins, polymers, lipids, DNA/RNA, polysaccharides, organometallic compounds etc. Mass range 500-500 KDa.

Requires co-crystalization of sample with matrix.

Information on matrices can be found Selection Guide of Suitable MALDI Matrix and  here.

Submission form for MALDI-TOF analysis.

 

Equipment Used: Bruker Autoflex maX MALDI-TOF/TOF

Facility: Mass Spectrometry